BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011C04SP1|AL426177
(810 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig602 1250 0.0
>3x_Contig602
Length = 2648
Score = 1250 bits (628), Expect = 0.0
Identities = 638/645 (98%)
Strand = Plus / Minus
Query: 166 tcataaaagatactgagacacagcatcttaaaaaaaagaaaaaactccatttcaacgaac 225
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2644 tcataaaggatactgagacacagcatcttaaaaaaaagaaaaaactccatttcaacgaac 2585
Query: 226 atacctcatctttaattaataagcttgaccgtagcgtgcctatcgaatacaataacgcga 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2584 atacctcatctttaattaataagcttgaccgtagcgtgcctatcgaatacaataacgcga 2525
Query: 286 tatcagcaccaaacgattctattatcgttgtcttaacgcctggnacagcaaaagatgatg 345
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2524 tatcagcaccaaacgattctattatcgttgtcttaacgcctggaacagcaaaagatgatg 2465
Query: 346 agtgctttccttgttgaaggggttagcaacttaaaaggatctttttgaagttcactttcc 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2464 agtgctttccttgttgaaggggttagcaacttaaaaggatctttttgaagttcactttcc 2405
Query: 406 acaattttcaaattcaatgatggcagaagacaggaagtcacgtgacaggragagcaaaam 465
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2404 acaattttcaaattcaatgatggcagaagacaggaagtcacgtgacaggaagagcaaaaa 2345
Query: 466 amatagaatacaatgcacaamagagaacctctcggaattgggcagcttgtatcatagcat 525
| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2344 aaatagaatacaatgcacaaaagagaacctctcggaattgggcagcttgtatcatagcat 2285
Query: 526 ccccgtcttattaatctgattctgatttcaaagtctcaacttcttgttgtaccgattgav 585
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2284 ccccgtcttattaatctgattctgatttcaaagtctcaacttcttgttgtaccgattgaa 2225
Query: 586 gccttttcctcagagaagccagtttcttttcgcggtcttctgacgaaccaagaaacaatt 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2224 gccttttcctcagagaagccagtttcttttcgcggtcttctgacgaaccaagaaacaatt 2165
Query: 646 cggttctgctactgtcgtccaacaagttgaaaagctccaccatattagctcttctagaca 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2164 cggttctgctactgtcgtccaacaagttgaaaagctccaccatattagctcttctagaca 2105
Query: 706 ataggtcttctgctgtgattgtcttgagattgactttcaaatcttgtggttgttcggttc 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2104 ataggtcttctgctgtgattgtcttgagattgactttcaaatcttgtggttgttcggttc 2045
Query: 766 cttgcgtggtggtcattgcgaaatacgataatactttgataaaac 810
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2044 cttgcgtggtggtcattgcgaaatacgataatactttgataaaac 2000
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7218
Number of Sequences: 1807
Number of extensions: 7218
Number of successful extensions: 70
Number of sequences better than 1.0e-20: 1
length of query: 810
length of database: 10,358,551
effective HSP length: 16
effective length of query: 794
effective length of database: 10,329,639
effective search space: 8201733366
effective search space used: 8201733366
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)